Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN05444374_104257 | Not Available | Negative | 1484702 - 1485514 | 29321.0 |
| hypothetical protein | SAMN05444374_104258 | Not Available | Positive | 1485528 - 1485806 | 9477.43 |
| uncharacterized zinc-type alcohol dehydrogenase-like protein | SAMN05444374_104259 | Not Available | Positive | 1485951 - 1486991 | 37110.2 |
| polyphosphate:nucleotide phosphotransferase, ppk2 family | SAMN05444374_104260 | Not Available | Negative | 1487043 - 1487897 | 32394.9 |
| rna polymerase sigma-b factor | SAMN05444374_104261 | Not Available | Negative | 1487927 - 1488718 | 29573.1 |
| serine/threonine-protein kinase rsbw | SAMN05444374_104262 | Not Available | Negative | 1488715 - 1489143 | 14785.2 |
| anti-anti-sigma factor | SAMN05444374_104263 | Not Available | Positive | 1489532 - 1489891 | 12402.6 |
| putative hydrolase | SAMN05444374_104264 | Not Available | Positive | 1489964 - 1491034 | 38172.9 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05444374_104265 | Not Available | Positive | 1491031 - 1493220 | 75816.3 |
| ppox class probable f420-dependent enzyme | SAMN05444374_104266 | Not Available | Positive | 1493230 - 1493697 | 17252.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.