Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase 2, pa0141 family | SAMN05444374_104237 | Not Available | Positive | 1463269 - 1464243 | 36834.3 |
| prolyl oligopeptidase | SAMN05444374_104238 | Not Available | Negative | 1464275 - 1466350 | 76388.0 |
| hypothetical protein | SAMN05444374_104239 | Not Available | Positive | 1466499 - 1467134 | 22089.6 |
| membrane dipeptidase | SAMN05444374_104240 | Not Available | Positive | 1467227 - 1468183 | 33996.4 |
| deazaflavin-dependent oxidoreductase, nitroreductase family | SAMN05444374_104241 | Not Available | Negative | 1468188 - 1468637 | 16316.9 |
| 2,5-diketo-d-gluconate reductase a | SAMN05444374_104242 | Not Available | Positive | 1468739 - 1469587 | 31740.7 |
| dihydrolipoamide dehydrogenase | SAMN05444374_104243 | Not Available | Positive | 1469695 - 1471098 | 49679.4 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05444374_104244 | Not Available | Negative | 1471155 - 1471694 | 19917.9 |
| hypothetical protein | SAMN05444374_104245 | Not Available | Negative | 1471721 - 1473139 | 52852.6 |
| isocitrate lyase | SAMN05444374_104246 | Not Available | Positive | 1473528 - 1474817 | 46819.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.