Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna ligase d | SAMN05444374_104217 | Not Available | Positive | 1444312 - 1445262 | 35957.2 |
| methyltransferase domain-containing protein | SAMN05444374_104218 | Not Available | Positive | 1445542 - 1446819 | 46853.5 |
| glucose-1-phosphate cytidylyltransferase | SAMN05444374_104219 | Not Available | Positive | 1446816 - 1447616 | 29810.4 |
| n-acetylglucosaminyl deacetylase, lmbe family | SAMN05444374_104220 | Not Available | Positive | 1447613 - 1448281 | 24230.8 |
| nucleoside-diphosphate-sugar epimerase | SAMN05444374_104221 | Not Available | Positive | 1448281 - 1449342 | 37589.7 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN05444374_104222 | Not Available | Negative | 1449359 - 1449919 | 20244.7 |
| putative zinc binding domain-containing protein | SAMN05444374_104223 | Not Available | Positive | 1449958 - 1451088 | 39180.7 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444374_104224 | Not Available | Positive | 1451085 - 1451918 | 30302.4 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05444374_104225 | Not Available | Positive | 1451921 - 1453192 | 43605.7 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN05444374_104226 | Not Available | Positive | 1453189 - 1454508 | 46669.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.