Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444374_104197 | Not Available | Negative | 1431274 - 1431852 | 21156.9 |
| uncharacterized conserved protein ylou, alkaline shock protein (asp23) family | SAMN05444374_104198 | Not Available | Positive | 1431997 - 1432494 | 16978.6 |
| hypothetical protein | SAMN05444374_104199 | Not Available | Positive | 1432491 - 1432835 | 11411.4 |
| hypothetical protein | SAMN05444374_104200 | Not Available | Positive | 1432832 - 1433125 | 11088.2 |
| small integral membrane protein | SAMN05444374_104201 | Not Available | Positive | 1433169 - 1433348 | 5811.14 |
| hypothetical protein | SAMN05444374_104202 | Not Available | Positive | 1433341 - 1434192 | 29245.5 |
| hypothetical protein | SAMN05444374_104203 | Not Available | Positive | 1434189 - 1434740 | 19283.6 |
| putative membrane protein | SAMN05444374_104204 | Not Available | Negative | 1434766 - 1435182 | 13938.0 |
| hypothetical protein | SAMN05444374_104205 | Not Available | Positive | 1435444 - 1435776 | 12259.4 |
| hypothetical protein | SAMN05444374_104206 | Not Available | Negative | 1435844 - 1436254 | 15222.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.