Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maoc like domain-containing protein | SAMN05444374_104126 | Not Available | Negative | 1358758 - 1359630 | 31277.9 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444374_104127 | Not Available | Negative | 1359632 - 1360978 | 46173.0 |
| acetyl-coa c-acetyltransferase | SAMN05444374_104128 | Not Available | Positive | 1361124 - 1362425 | 45741.1 |
| vancomycin resistance protein yoar, contains peptidoglycan-binding and vanw domains | SAMN05444374_104129 | Not Available | Positive | 1362703 - 1364400 | 59160.7 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05444374_104130 | Not Available | Positive | 1364505 - 1364999 | 17145.2 |
| 3-methylcrotonyl-coa carboxylase beta subunit | SAMN05444374_104131 | Not Available | Positive | 1365076 - 1366650 | 55741.5 |
| acetyl-coa/propionyl-coa carboxylase, biotin carboxylase, biotin carboxyl carrier protein | SAMN05444374_104132 | Not Available | Positive | 1366659 - 1368674 | 69995.8 |
| acyl-coa dehydrogenase | SAMN05444374_104133 | Not Available | Positive | 1368671 - 1369831 | 41114.7 |
| acyl dehydratase | SAMN05444374_104134 | Not Available | Positive | 1369828 - 1370310 | 17453.8 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN05444374_104135 | Not Available | Positive | 1370337 - 1371122 | 27501.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.