Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444374_104116 | Not Available | Positive | 1346331 - 1347284 | 34177.0 |
| hemerythrin hhe cation binding domain-containing protein | SAMN05444374_104117 | Not Available | Negative | 1347292 - 1347936 | 24019.2 |
| alcohol dehydrogenase | SAMN05444374_104118 | Not Available | Positive | 1348348 - 1349325 | 34259.9 |
| protein of unknown function | SAMN05444374_104119 | Not Available | Negative | 1349330 - 1350484 | 41502.1 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05444374_104120 | Not Available | Positive | 1350648 - 1351871 | 42973.1 |
| arabinofuranan 3-o-arabinosyltransferase | SAMN05444374_104121 | Not Available | Negative | 1351718 - 1356034 | 149393.0 |
| protein of unknown function | SAMN05444374_104122 | Not Available | Negative | 1356094 - 1356255 | 5253.13 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444374_104123 | Not Available | Negative | 1356292 - 1356759 | 16730.9 |
| beta-n-acetylhexosaminidase | SAMN05444374_104124 | Not Available | Positive | 1356850 - 1358046 | 40116.0 |
| transcriptional regulator, tetr family | SAMN05444374_104125 | Not Available | Positive | 1358102 - 1358689 | 21266.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.