Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyisoprenoid-binding protein ycei | SAMN05444374_10496 | Not Available | Negative | 1321983 - 1322534 | 19224.6 |
| hypothetical protein | SAMN05444374_10497 | Not Available | Negative | 1322608 - 1323621 | 34780.6 |
| adenylate cyclase | SAMN05444374_10498 | Not Available | Negative | 1323761 - 1325311 | 56012.7 |
| predicted purr-regulated permease perm | SAMN05444374_10499 | Not Available | Positive | 1325385 - 1326602 | 42020.2 |
| signal transduction histidine kinase | SAMN05444374_104100 | Not Available | Positive | 1326574 - 1327716 | 38847.7 |
| two component transcriptional regulator, luxr family | SAMN05444374_104101 | Not Available | Positive | 1327689 - 1328351 | 23157.5 |
| protein of unknown function | SAMN05444374_104102 | Not Available | Positive | 1328411 - 1329025 | 21703.9 |
| predicted membrane protein | SAMN05444374_104103 | Not Available | Positive | 1329252 - 1331084 | 60148.4 |
| putative drug exporter of the rnd superfamily | SAMN05444374_104104 | Not Available | Negative | 1331044 - 1334157 | 110201.0 |
| uncharacterized protein | SAMN05444374_104105 | Not Available | Negative | 1334158 - 1334865 | 25220.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.