Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN05444374_10466 | Not Available | Positive | 1288818 - 1289972 | 38874.4 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05444374_10467 | Not Available | Positive | 1289978 - 1290772 | 27609.3 |
| d-xylose transport system permease protein | SAMN05444374_10468 | Not Available | Positive | 1290769 - 1292181 | 47966.7 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05444374_10469 | Not Available | Positive | 1292178 - 1293302 | 38302.8 |
| mannitol 2-dehydrogenase | SAMN05444374_10470 | Not Available | Negative | 1293318 - 1294808 | 54676.5 |
| l-iditol 2-dehydrogenase | SAMN05444374_10471 | Not Available | Negative | 1294805 - 1295827 | 35653.0 |
| dna-binding transcriptional regulator lsrr, deor family | SAMN05444374_10472 | Not Available | Positive | 1295927 - 1296919 | 34891.6 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05444374_10473 | Not Available | Positive | 1296927 - 1298276 | 47872.3 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05444374_10474 | Not Available | Positive | 1298276 - 1299223 | 34669.0 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05444374_10475 | Not Available | Positive | 1299223 - 1300104 | 31733.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.