Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05444374_10446 | Not Available | Positive | 1268579 - 1269907 | 47284.9 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05444374_10447 | Not Available | Positive | 1269926 - 1271008 | 38965.5 |
| putative endopeptidase | SAMN05444374_10448 | Not Available | Negative | 1271084 - 1273063 | 73284.9 |
| dna-binding transcriptional regulator, marr family | SAMN05444374_10449 | Not Available | Negative | 1273117 - 1273572 | 16294.7 |
| hypothetical protein | SAMN05444374_10450 | Not Available | Positive | 1273636 - 1274001 | 12846.1 |
| maltokinase | SAMN05444374_10451 | Not Available | Positive | 1274219 - 1275673 | 51095.1 |
| release factor glutamine methyltransferase | SAMN05444374_10452 | Not Available | Positive | 1275670 - 1276443 | 27532.7 |
| hypothetical protein | SAMN05444374_10453 | Not Available | Negative | 1276434 - 1277363 | 32703.9 |
| hypothetical protein | SAMN05444374_10454 | Not Available | Positive | 1277561 - 1277917 | 12222.6 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05444374_10455 | Not Available | Negative | 1277975 - 1278778 | 26626.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.