Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna ligase d | SAMN05444374_10436 | Not Available | Positive | 1257916 - 1259001 | 40648.6 |
| hypothetical protein | SAMN05444374_10437 | Not Available | Positive | 1259122 - 1259745 | 22465.4 |
| res domain-containing protein | SAMN05444374_10438 | Not Available | Positive | 1259755 - 1260390 | 23327.8 |
| sodium/proton antiporter, nhaa family | SAMN05444374_10439 | Not Available | Negative | 1260436 - 1262295 | 66972.2 |
| starvation-inducible dna-binding protein | SAMN05444374_10440 | Not Available | Negative | 1262373 - 1262933 | 19962.2 |
| hypothetical protein | SAMN05444374_10441 | Not Available | Positive | 1263088 - 1264098 | 37584.2 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05444374_10442 | Not Available | Negative | 1264121 - 1265467 | 47521.6 |
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN05444374_10443 | Not Available | Positive | 1265651 - 1266598 | 32937.9 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05444374_10444 | Not Available | Positive | 1266748 - 1267674 | 34831.8 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05444374_10445 | Not Available | Positive | 1267671 - 1268537 | 31710.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.