Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | SAMN05444374_103290 | Not Available | Negative | 1189857 - 1190630 | 27398.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05444374_103291 | Not Available | Negative | 1190932 - 1191846 | 31858.8 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444374_103292 | Not Available | Positive | 1191981 - 1192727 | 26183.0 |
| low temperature requirement protein ltra | SAMN05444374_103293 | Not Available | Positive | 1192952 - 1194121 | 42453.8 |
| snoal-like domain-containing protein | SAMN05444374_103294 | Not Available | Positive | 1194219 - 1194530 | 10889.0 |
| anti-anti-sigma factor | SAMN05444374_103295 | Not Available | Negative | 1194575 - 1194943 | 12919.4 |
| hypothetical protein | SAMN05444374_103296 | Not Available | Negative | 1195000 - 1195380 | 13721.5 |
| hypothetical protein | SAMN05444374_103297 | Not Available | Negative | 1195592 - 1195966 | 13253.0 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05444374_103298 | Not Available | Negative | 1196123 - 1197505 | 49054.6 |
| fatty acid coa ligase fadd32 | SAMN05444374_103299 | Not Available | Negative | 1198059 - 1199972 | 68980.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.