Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-l-rhamnose 4-epimerase | SAMN05444374_103280 | Not Available | Positive | 1179730 - 1180791 | 36970.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444374_103281 | Not Available | Positive | 1180794 - 1181450 | 23088.7 |
| hypothetical protein | SAMN05444374_103282 | Not Available | Positive | 1181447 - 1182139 | 24069.6 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN05444374_103283 | Not Available | Positive | 1182136 - 1182534 | 14156.6 |
| hypothetical protein | SAMN05444374_103284 | Not Available | Positive | 1182779 - 1182871 | 3421.19 |
| hypothetical protein | SAMN05444374_103285 | Not Available | Positive | 1182951 - 1183391 | 16136.5 |
| hypothetical protein | SAMN05444374_103286 | Not Available | Positive | 1184086 - 1184616 | 19136.6 |
| alkane 1-monooxygenase | SAMN05444374_103287 | Not Available | Positive | 1184919 - 1186034 | 41649.5 |
| para-aminobenzoate synthetase | SAMN05444374_103288 | Not Available | Positive | 1186544 - 1188625 | 74594.0 |
| lsr2 protein | SAMN05444374_103289 | Not Available | Negative | 1188886 - 1189203 | 11966.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.