Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit a | SAMN05444374_10134 | Not Available | Negative | 33741 - 35222 | 51419.7 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit c | SAMN05444374_10135 | Not Available | Negative | 35219 - 35545 | 11217.0 |
| hypothetical protein | SAMN05444374_10136 | Not Available | Positive | 35643 - 36293 | 22370.7 |
| dna ligase (nad+) | SAMN05444374_10137 | Not Available | Negative | 36261 - 38348 | 75245.6 |
| cobalamin-independent synthase, catalytic domain | SAMN05444374_10138 | Not Available | Negative | 38462 - 39496 | 35473.3 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | SAMN05444374_10139 | Not Available | Negative | 39493 - 40668 | 40063.1 |
| cysteine desulfurase | SAMN05444374_10140 | Not Available | Negative | 40676 - 41899 | 42008.8 |
| lyso-ornithine lipid acyltransferase | SAMN05444374_10141 | Not Available | Negative | 41978 - 42862 | 30999.8 |
| ornithine-acyl[acyl carrier protein] n-acyltransferase | SAMN05444374_10142 | Not Available | Negative | 42874 - 43770 | 32244.3 |
| electron transfer flavoprotein alpha subunit apoprotein | SAMN05444374_10143 | Not Available | Negative | 43909 - 44865 | 32233.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.