Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage integrase family protein | SAMN05444374_103210 | Not Available | Positive | 1109067 - 1109939 | 33264.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05444374_103211 | Not Available | Positive | 1110067 - 1111020 | 35033.8 |
| protein of unknown function | SAMN05444374_103212 | Not Available | Positive | 1111241 - 1112212 | 36749.9 |
| methionine synthase (b12-independent) | SAMN05444374_103213 | Not Available | Positive | 1112244 - 1113269 | 37781.9 |
| citrate synthase | SAMN05444374_103214 | Not Available | Negative | 1113513 - 1114637 | 41356.5 |
| methylisocitrate lyase | SAMN05444374_103215 | Not Available | Negative | 1114637 - 1115551 | 32271.5 |
| 2-methylcitrate dehydratase | SAMN05444374_103216 | Not Available | Negative | 1115548 - 1117053 | 54528.9 |
| hypothetical protein | SAMN05444374_103217 | Not Available | Positive | 1117268 - 1118701 | 52709.0 |
| hypothetical protein | SAMN05444374_103218 | Not Available | Negative | 1118760 - 1118987 | 8488.39 |
| hypothetical protein | SAMN05444374_103219 | Not Available | Negative | 1119140 - 1119352 | 7949.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.