Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnopyranosyl-n-acetylglucosaminyl-diphospho- decaprenol beta-1,3/1,4-galactofuranosyltransferase | SAMN05444374_103160 | Not Available | Positive | 1050868 - 1051785 | 34010.6 |
| methyltransferase domain-containing protein | SAMN05444374_103161 | Not Available | Positive | 1051861 - 1052676 | 30225.6 |
| galactofuranosylgalactofuranosylrhamnosyl-n- acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase | SAMN05444374_103162 | Not Available | Negative | 1052663 - 1054531 | 69105.2 |
| glycosyl transferase family 2 | SAMN05444374_103163 | Not Available | Negative | 1054671 - 1055468 | 28819.4 |
| hypothetical protein | SAMN05444374_103164 | Not Available | Positive | 1055572 - 1057782 | 78708.1 |
| predicted dehydrogenase | SAMN05444374_103165 | Not Available | Negative | 1057795 - 1058772 | 35387.8 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN05444374_103166 | Not Available | Negative | 1058772 - 1059872 | 39400.5 |
| udp-n-acetylglucosamine acyltransferase | SAMN05444374_103167 | Not Available | Positive | 1060026 - 1060751 | 25100.9 |
| hypothetical protein | SAMN05444374_103168 | Not Available | Positive | 1060748 - 1061731 | 33988.6 |
| hypothetical protein | SAMN05444374_103169 | Not Available | Negative | 1061752 - 1063455 | 60292.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.