Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcoides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcoides |
| Species | Rhodococcoides kroppenstedtii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cold desert of Himalayas, India; pistachio tree |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
610365 bp
Thymine Count
611863 bp
Guanine Count
1426590 bp
Cytosine Count
1434008 bp
Genome Length
4082826 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-formylglutathione hydrolase frmb | SAMN05444374_103150 | Not Available | Negative | 1040671 - 1041687 | 35664.3 |
| pucr c-terminal helix-turn-helix domain-containing protein | SAMN05444374_103151 | Not Available | Positive | 1042211 - 1043509 | 46541.5 |
| Trna-ser | Not Available | Not Available | Positive | 1043743 - 1043832 | Not Available |
| fmn-dependent dehydrogenase, includes l-lactate dehydrogenase and type ii isopentenyl diphosphate isomerase | SAMN05444374_103153 | Not Available | Negative | 1043893 - 1045068 | 40417.2 |
| l-glyceraldehyde 3-phosphate reductase | SAMN05444374_103154 | Not Available | Positive | 1045150 - 1046181 | 37688.4 |
| putative nad(p)h quinone oxidoreductase, pig3 family | SAMN05444374_103155 | Not Available | Positive | 1046216 - 1047205 | 33951.8 |
| cysteine desulfurase | SAMN05444374_103156 | Not Available | Negative | 1047229 - 1048428 | 41942.8 |
| protein of unknown function | SAMN05444374_103157 | Not Available | Positive | 1048521 - 1049129 | 21155.8 |
| abc-2 type transport system permease protein | SAMN05444374_103158 | Not Available | Positive | 1049148 - 1050008 | 32263.0 |
| abc-2 type transport system atp-binding protein | SAMN05444374_103159 | Not Available | Positive | 1050024 - 1050875 | 30497.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.