Sphingopyxis sp. 113P3

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis sp. 113P3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis sp. 113P3 chromosome, complete genome.

Gene Summary

Adenine Count

792758 bp

Thymine Count

796672 bp

Guanine Count

1421511 bp

Cytosine Count

1409835 bp

Genome Length

4420776 bp

Protein-coding Genes

4174 genes

Non-Coding Genes

132 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alkyl hydroperoxide reductase subunit fLH20_RS04240Not AvailablePositive899515 - 90109856533.9
glycerol-3-phosphate dehydrogenaseLH20_RS04245Not AvailableNegative901180 - 90270055789.3
glucose-6-phosphate dehydrogenaseLH20_RS04250Not AvailablePositive902888 - 90429151795.1
phosphogluconate dehydrataseLH20_RS04255Not AvailablePositive904481 - 90632264927.1
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseLH20_RS04260Not AvailablePositive906427 - 90704720485.2
dienelactone hydrolase family proteinLH20_RS04265Not AvailablePositive907142 - 90793928845.0
ribonuclease phLH20_RS04270Not AvailablePositive907988 - 90870425396.3
rdgb/ham1 family non-canonical purine ntp pyrophosphataseLH20_RS04275Not AvailablePositive908706 - 90933522433.4
duf2239 family proteinLH20_RS04280Not AvailablePositive909387 - 90989918696.2
radical sam family heme chaperone hemwLH20_RS04285Not AvailablePositive909961 - 91110641149.6

Displaying genes 981 – 990 of 4549 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000523nonane-4,6-dioneC9H16O2Chemical structure of nonane-4,6-dioneNot available
Average156.225Da
Monoisotopic156.115029755Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0040407Sphingopyxis sp. 113P3Not availableNot availableNot available

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.