Sphingopyxis sp. 113P3

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis sp. 113P3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis sp. 113P3 chromosome, complete genome.

Gene Summary

Adenine Count

792758 bp

Thymine Count

796672 bp

Guanine Count

1421511 bp

Cytosine Count

1409835 bp

Genome Length

4420776 bp

Protein-coding Genes

4174 genes

Non-Coding Genes

132 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cysteine--trna ligaseLH20_RS03255Not AvailableNegative695225 - 69667053808.7
hypothetical proteinLH20_RS03260Not AvailableNegative696717 - 705524278693.0
shlb/fhac/hecb family hemolysin secretion/activation proteinLH20_RS03265Not AvailableNegative705556 - 70737965211.6
hypothetical proteinLH20_RS03270Not AvailableNegative707556 - 70832026381.6
adenylate/guanylate cyclase domain-containing proteinLH20_RS03275Not AvailableNegative708307 - 71039475517.0
chat domain-containing proteinLH20_RS03280Not AvailableNegative710398 - 713493109476.0
duf1476 domain-containing proteinLH20_RS03285Not AvailablePositive713707 - 71403312002.9
bola/ibag family iron-sulfur metabolism proteinLH20_RS03290Not AvailablePositive714047 - 7142808040.67
grx4 family monothiol glutaredoxinLH20_RS03295Not AvailablePositive714332 - 71466412401.1
alkylphosphonate utilization proteinLH20_RS03300Not AvailableNegative714813 - 71512111021.0

Displaying genes 801 – 810 of 4549 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000523nonane-4,6-dioneC9H16O2Chemical structure of nonane-4,6-dioneNot available
Average156.225Da
Monoisotopic156.115029755Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0040407Sphingopyxis sp. 113P3Not availableNot availableNot available

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.