Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. 113P3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
792758 bp
Thymine Count
796672 bp
Guanine Count
1421511 bp
Cytosine Count
1409835 bp
Genome Length
4420776 bp
Protein-coding Genes
4174 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system minor pseudopilin gspj | LH20_RS03105 | Not Available | Positive | 669579 - 670205 | 21711.3 |
| type ii secretion system minor pseudopilin gspk | LH20_RS03110 | Not Available | Positive | 670202 - 671206 | 35374.5 |
| type ii secretion system protein gspl | LH20_RS03115 | Not Available | Positive | 671208 - 672359 | 40044.3 |
| type ii secretion system protein gspm | LH20_RS03120 | Not Available | Positive | 672356 - 672838 | 16951.3 |
| type ii secretion system protein n | LH20_RS03125 | Not Available | Positive | 672835 - 673554 | 24778.2 |
| a24 family peptidase | LH20_RS03130 | Not Available | Positive | 673556 - 674338 | 27789.8 |
| peptidoglycan-associated lipoprotein pal | LH20_RS03135 | Not Available | Negative | 674325 - 674837 | 18382.5 |
| tol-pal system beta propeller repeat protein tolb | LH20_RS03140 | Not Available | Negative | 674952 - 676331 | 49654.9 |
| hypothetical protein | LH20_RS03145 | Not Available | Negative | 676337 - 677164 | 29418.7 |
| exbd/tolr family protein | LH20_RS03150 | Not Available | Negative | 677174 - 677638 | 16429.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.