Sphingopyxis sp. 113P3

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis sp. 113P3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis sp. 113P3 chromosome, complete genome.

Gene Summary

Adenine Count

792758 bp

Thymine Count

796672 bp

Guanine Count

1421511 bp

Cytosine Count

1409835 bp

Genome Length

4420776 bp

Protein-coding Genes

4174 genes

Non-Coding Genes

132 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix domain-containing proteinLH20_RS02555Not AvailablePositive562497 - 56338432532.5
suf system fe-s cluster assembly regulatorLH20_RS02560Not AvailablePositive563668 - 56415916199.5
fe-s cluster assembly protein sufbLH20_RS02565Not AvailablePositive564164 - 56565154952.0
hypothetical proteinLH20_RS02570Not AvailablePositive565651 - 5658487249.52
fe-s cluster assembly atpase sufcLH20_RS02575Not AvailablePositive565835 - 56657826761.4
sufd family fe-s cluster assembly proteinLH20_RS02580Not AvailablePositive566575 - 56730625466.5
aminotransferase class v-fold plp-dependent enzymeLH20_RS02585Not AvailablePositive567330 - 56848441070.1
suf system fe-s cluster assembly proteinLH20_RS02590Not AvailablePositive568481 - 56895117064.2
iron-sulfur cluster assembly accessory proteinLH20_RS02595Not AvailablePositive569060 - 56942212739.1
gamma-glutamyltransferaseLH20_RS02600Not AvailablePositive569494 - 57118860060.1

Displaying genes 661 – 670 of 4549 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000523nonane-4,6-dioneC9H16O2Chemical structure of nonane-4,6-dioneNot available
Average156.225Da
Monoisotopic156.115029755Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0040407Sphingopyxis sp. 113P3Not availableNot availableNot available

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.