Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. 113P3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
792758 bp
Thymine Count
796672 bp
Guanine Count
1421511 bp
Cytosine Count
1409835 bp
Genome Length
4420776 bp
Protein-coding Genes
4174 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yggs family pyridoxal phosphate-dependent enzyme | LH20_RS21155 | Not Available | Negative | 4354618 - 4355280 | 23085.8 |
| thiamine phosphate synthase | LH20_RS21160 | Not Available | Positive | 4355340 - 4355966 | 22674.8 |
| hypothetical protein | LH20_RS21165 | Not Available | Negative | 4355939 - 4356652 | 25626.5 |
| duf3576 domain-containing protein | LH20_RS21170 | Not Available | Positive | 4356941 - 4357402 | 16299.6 |
| leucine--trna ligase | LH20_RS21175 | Not Available | Positive | 4357453 - 4360002 | 93979.7 |
| lps assembly lipoprotein lpte | LH20_RS21180 | Not Available | Positive | 4360004 - 4360540 | 18668.2 |
| dna polymerase iii subunit delta | LH20_RS21185 | Not Available | Positive | 4360537 - 4361568 | 36410.3 |
| sodium:proton antiporter | LH20_RS21190 | Not Available | Negative | 4361604 - 4363421 | 64967.3 |
| tonb-dependent receptor | LH20_RS21195 | Not Available | Negative | 4363526 - 4366327 | 99348.5 |
| ligase-associated dna damage response endonuclease pdem | LH20_RS21200 | Not Available | Negative | 4366484 - 4367200 | 25707.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.