Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. 113P3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
792758 bp
Thymine Count
796672 bp
Guanine Count
1421511 bp
Cytosine Count
1409835 bp
Genome Length
4420776 bp
Protein-coding Genes
4174 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer atpase trbb | LH20_RS19800 | Not Available | Negative | 4108447 - 4109427 | 34286.6 |
| luxr c-terminal-related transcriptional regulator | LH20_RS19805 | Not Available | Positive | 4109648 - 4110166 | 18967.9 |
| hypothetical protein | LH20_RS19810 | Not Available | Positive | 4110228 - 4110560 | 11414.7 |
| hypothetical protein | LH20_RS23615 | Not Available | Positive | 4110602 - 4111075 | 17454.6 |
| jab domain-containing protein | LH20_RS23620 | Not Available | Positive | 4111213 - 4112013 | 29625.9 |
| ribbon-helix-helix protein, copg family | LH20_RS19825 | Not Available | Negative | 4111989 - 4112429 | 16628.9 |
| conjugal transfer protein trag | LH20_RS19830 | Not Available | Negative | 4112426 - 4114474 | 74710.6 |
| duf3363 domain-containing protein | LH20_RS19835 | Not Available | Negative | 4114503 - 4116248 | 63919.4 |
| lytic transglycosylase domain-containing protein | LH20_RS19840 | Not Available | Negative | 4116480 - 4117229 | 25807.8 |
| duf736 domain-containing protein | LH20_RS19845 | Not Available | Negative | 4117233 - 4117565 | 11974.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.