Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. 113P3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
792758 bp
Thymine Count
796672 bp
Guanine Count
1421511 bp
Cytosine Count
1409835 bp
Genome Length
4420776 bp
Protein-coding Genes
4174 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | LH20_RS16305 | Not Available | Negative | 3377305 - 3377862 | 19812.0 |
| spermidine synthase | LH20_RS16310 | Not Available | Negative | 3377859 - 3380102 | 80935.8 |
| hypothetical protein | LH20_RS16315 | Not Available | Negative | 3380099 - 3380278 | 6618.17 |
| porphobilinogen synthase | LH20_RS16320 | Not Available | Negative | 3380275 - 3381273 | 35618.5 |
| m23 family metallopeptidase | LH20_RS24255 | Not Available | Negative | 3381357 - 3382898 | 54857.2 |
| helicase-related protein | LH20_RS16330 | Not Available | Positive | 3383184 - 3385943 | 98617.5 |
| rna-binding s4 domain-containing protein | LH20_RS16335 | Not Available | Positive | 3385943 - 3386302 | 12604.2 |
| ferredoxin fdxa | LH20_RS16340 | Not Available | Positive | 3386416 - 3386754 | 12492.5 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | LH20_RS16345 | Not Available | Positive | 3386933 - 3387583 | 23809.9 |
| atp-dependent clp protease atp-binding subunit clpx | LH20_RS16350 | Not Available | Positive | 3387768 - 3389036 | 45705.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.