Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. 113P3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
792758 bp
Thymine Count
796672 bp
Guanine Count
1421511 bp
Cytosine Count
1409835 bp
Genome Length
4420776 bp
Protein-coding Genes
4174 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | LH20_RS16260 | Not Available | Negative | 3367734 - 3368657 | 34279.0 |
| hypothetical protein | LH20_RS23570 | Not Available | Positive | 3368761 - 3368922 | 6079.17 |
| ribosome maturation factor rimm | LH20_RS16265 | Not Available | Negative | 3369022 - 3369531 | 17735.2 |
| 30s ribosomal protein s16 | LH20_RS16270 | Not Available | Negative | 3369535 - 3370131 | 20733.7 |
| signal recognition particle protein | LH20_RS16275 | Not Available | Negative | 3370168 - 3371619 | 51090.0 |
| bifunctional diguanylate cyclase/phosphodiesterase | LH20_RS16280 | Not Available | Positive | 3371892 - 3373529 | 59176.6 |
| diaminopimelate epimerase | LH20_RS16285 | Not Available | Positive | 3373620 - 3374426 | 28506.2 |
| miab/rimo family radical sam methylthiotransferase | LH20_RS16290 | Not Available | Positive | 3374423 - 3375688 | 44809.8 |
| signal recognition particle-docking protein ftsy | LH20_RS16295 | Not Available | Positive | 3375685 - 3376611 | 32585.4 |
| inner membrane-spanning protein ycib | LH20_RS16300 | Not Available | Positive | 3376608 - 3377279 | 24424.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.