Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. 113P3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
792758 bp
Thymine Count
796672 bp
Guanine Count
1421511 bp
Cytosine Count
1409835 bp
Genome Length
4420776 bp
Protein-coding Genes
4174 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rip metalloprotease rsep | LH20_RS13685 | Not Available | Negative | 2795214 - 2796344 | 40965.0 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | LH20_RS13690 | Not Available | Negative | 2796337 - 2797500 | 40150.2 |
| phosphatidate cytidylyltransferase | LH20_RS13695 | Not Available | Negative | 2797502 - 2798179 | 22993.1 |
| polyprenyl diphosphate synthase | LH20_RS13700 | Not Available | Negative | 2798181 - 2798867 | 25193.2 |
| ribosome recycling factor | LH20_RS13705 | Not Available | Negative | 2798990 - 2799544 | 20342.4 |
| ump kinase | LH20_RS13710 | Not Available | Negative | 2799559 - 2800290 | 25571.2 |
| translation elongation factor ts | LH20_RS13715 | Not Available | Negative | 2800409 - 2801335 | 31439.4 |
| 30s ribosomal protein s2 | LH20_RS13720 | Not Available | Negative | 2801478 - 2802311 | 29621.2 |
| hypothetical protein | LH20_RS13725 | Not Available | Positive | 2802688 - 2802945 | 8596.84 |
| phosphatidylcholine/phosphatidylserine synthase | LH20_RS13730 | Not Available | Negative | 2802908 - 2803702 | 28129.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.