Sphingopyxis sp. 113P3

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis sp. 113P3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis sp. 113P3 chromosome, complete genome.

Gene Summary

Adenine Count

792758 bp

Thymine Count

796672 bp

Guanine Count

1421511 bp

Cytosine Count

1409835 bp

Genome Length

4420776 bp

Protein-coding Genes

4174 genes

Non-Coding Genes

132 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cystathionine beta-lyaseLH20_RS00595Not AvailablePositive138183 - 13938843030.6
mechanosensitive ion channel family proteinLH20_RS00600Not AvailablePositive139385 - 14031433621.3
inorganic diphosphataseLH20_RS00605Not AvailableNegative140396 - 14093219583.7
m61 family metallopeptidaseLH20_RS00610Not AvailableNegative141114 - 14305171537.8
histidine--trna ligaseLH20_RS00615Not AvailablePositive143146 - 14439945350.7
peptide chain release factor 1LH20_RS00620Not AvailablePositive144399 - 14546638632.0
peptide chain release factor n(5)-glutamine methyltransferaseLH20_RS00625Not AvailablePositive145459 - 14632230554.6
duf4167 domain-containing proteinLH20_RS00630Not AvailablePositive146591 - 14735828723.0
duf4139 domain-containing proteinLH20_RS00635Not AvailablePositive147479 - 14882548246.9
duf4139 domain-containing proteinLH20_RS00640Not AvailablePositive148836 - 15040756433.9

Displaying genes 271 – 280 of 4549 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000523nonane-4,6-dioneC9H16O2Chemical structure of nonane-4,6-dioneNot available
Average156.225Da
Monoisotopic156.115029755Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0040407Sphingopyxis sp. 113P3Not availableNot availableNot available

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.