Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. 113P3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
792758 bp
Thymine Count
796672 bp
Guanine Count
1421511 bp
Cytosine Count
1409835 bp
Genome Length
4420776 bp
Protein-coding Genes
4174 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tatd family hydrolase | LH20_RS11645 | Not Available | Negative | 2378029 - 2378805 | 28304.2 |
| methionine--trna ligase | LH20_RS11650 | Not Available | Negative | 2378805 - 2380391 | 59264.1 |
| dna polymerase iii subunit delta' | LH20_RS11655 | Not Available | Negative | 2380468 - 2381445 | 35311.8 |
| dtmp kinase | LH20_RS11660 | Not Available | Negative | 2381442 - 2382071 | 21959.1 |
| d-alanyl-d-alanine carboxypeptidase family protein | LH20_RS11665 | Not Available | Negative | 2382065 - 2383288 | 43090.2 |
| septal ring lytic transglycosylase rlpa family protein | LH20_RS11670 | Not Available | Negative | 2383288 - 2384256 | 32532.9 |
| lytic transglycosylase domain-containing protein | LH20_RS11675 | Not Available | Negative | 2384240 - 2385238 | 36480.1 |
| Trna-ser | Not Available | Not Available | Positive | 2385478 - 2385567 | Not Available |
| isl3 family transposase | LH20_RS11685 | Not Available | Negative | 2385654 - 2386859 | 46791.0 |
| is110 family transposase | LH20_RS11690 | Not Available | Negative | 2387107 - 2388132 | 37720.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.