Sphingopyxis sp. 113P3

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis sp. 113P3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis sp. 113P3 chromosome, complete genome.

Gene Summary

Adenine Count

792758 bp

Thymine Count

796672 bp

Guanine Count

1421511 bp

Cytosine Count

1409835 bp

Genome Length

4420776 bp

Protein-coding Genes

4174 genes

Non-Coding Genes

132 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mannose-1-phosphate guanylyltransferaseLH20_RS09595Not AvailableNegative1979438 - 198052038198.7
mfs transporterLH20_RS09600Not AvailableNegative1980659 - 198193045715.0
cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseLH20_RS09605Not AvailablePositive1982077 - 198264920688.2
molybdopterin converting factor subunit 1LH20_RS09610Not AvailablePositive1982655 - 19829068634.41
molybdenum cofactor biosynthesis protein moaeLH20_RS09615Not AvailablePositive1982903 - 198334315577.6
hydrogen peroxide-inducible genes activatorLH20_RS09620Not AvailableNegative1983369 - 198427433234.4
methylenetetrahydrofolate--trna-(uracil(54)- c(5))-methyltransferase (fadh(2)-oxidizing) trmfoLH20_RS09625Not AvailableNegative1984442 - 198578848232.8
lysoplasmalogenase family proteinLH20_RS09630Not AvailablePositive1985865 - 198652723681.1
host attachment family proteinLH20_RS09635Not AvailableNegative1986543 - 198700416559.8
taud/tfda family dioxygenaseLH20_RS09640Not AvailableNegative1987057 - 198791130904.6

Displaying genes 2021 – 2030 of 4549 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000523nonane-4,6-dioneC9H16O2Chemical structure of nonane-4,6-dioneNot available
Average156.225Da
Monoisotopic156.115029755Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0040407Sphingopyxis sp. 113P3Not availableNot availableNot available

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.