Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. 113P3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
792758 bp
Thymine Count
796672 bp
Guanine Count
1421511 bp
Cytosine Count
1409835 bp
Genome Length
4420776 bp
Protein-coding Genes
4174 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urca family protein | LH20_RS09495 | Not Available | Positive | 1956922 - 1957260 | 11613.0 |
| lyttr family dna-binding domain-containing protein | LH20_RS09500 | Not Available | Negative | 1957314 - 1958045 | 27267.9 |
| sensor histidine kinase | LH20_RS09505 | Not Available | Negative | 1958047 - 1959219 | 43590.1 |
| mate family efflux transporter | LH20_RS09510 | Not Available | Negative | 1959308 - 1960768 | 50900.4 |
| valine--trna ligase | LH20_RS09515 | Not Available | Negative | 1960765 - 1963446 | 100585.0 |
| s9 family peptidase | LH20_RS09520 | Not Available | Negative | 1963601 - 1965676 | 75418.6 |
| lysr family transcriptional regulator | LH20_RS09525 | Not Available | Negative | 1965718 - 1966584 | 30496.5 |
| hypothetical protein | LH20_RS09530 | Not Available | Positive | 1966676 - 1967044 | 13286.6 |
| hypothetical protein | LH20_RS09535 | Not Available | Positive | 1967153 - 1967437 | 9839.77 |
| amidohydrolase family protein | LH20_RS09540 | Not Available | Negative | 1967441 - 1968727 | 45145.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.