Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. 113P3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
792758 bp
Thymine Count
796672 bp
Guanine Count
1421511 bp
Cytosine Count
1409835 bp
Genome Length
4420776 bp
Protein-coding Genes
4174 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybab/ebfc family nucleoid-associated protein | LH20_RS07385 | Not Available | Positive | 1545017 - 1545352 | 11881.4 |
| endopeptidase la | LH20_RS07390 | Not Available | Positive | 1545527 - 1547923 | 87186.5 |
| hu family dna-binding protein | LH20_RS07395 | Not Available | Positive | 1548094 - 1548366 | 9320.14 |
| Trna-val | Not Available | Not Available | Positive | 1548527 - 1548601 | Not Available |
| hypothetical protein | LH20_RS07405 | Not Available | Positive | 1548676 - 1548990 | 11393.0 |
| response regulator transcription factor | LH20_RS07410 | Not Available | Positive | 1549101 - 1549766 | 24623.2 |
| hamp domain-containing sensor histidine kinase | LH20_RS07415 | Not Available | Positive | 1549883 - 1551187 | 47446.0 |
| hypothetical protein | LH20_RS07420 | Not Available | Negative | 1551279 - 1552112 | 27056.4 |
| integrase core domain-containing protein | LH20_RS07425 | Not Available | Positive | 1552425 - 1553450 | 38579.0 |
| dna-directed rna polymerase subunit beta | LH20_RS07430 | Not Available | Positive | 1553672 - 1557850 | 154019.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.