Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. 113P3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
792758 bp
Thymine Count
796672 bp
Guanine Count
1421511 bp
Cytosine Count
1409835 bp
Genome Length
4420776 bp
Protein-coding Genes
4174 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | LH20_RS06905 | Not Available | Positive | 1444730 - 1445419 | 25682.6 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 1445470 - 1445864 | Not Available |
| hypothetical protein | LH20_RS23730 | Not Available | Positive | 1445937 - 1446092 | 5571.85 |
| hypothetical protein | LH20_RS06910 | Not Available | Negative | 1446103 - 1446750 | 22756.0 |
| transcription elongation factor greb | LH20_RS06915 | Not Available | Negative | 1446833 - 1447315 | 17664.0 |
| transglycosylase slt domain-containing protein | LH20_RS06920 | Not Available | Negative | 1447322 - 1449346 | 72818.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | LH20_RS06925 | Not Available | Positive | 1449457 - 1450332 | 30590.5 |
| ssra-binding protein smpb | LH20_RS06930 | Not Available | Positive | 1450341 - 1450826 | 18449.2 |
| duf2062 domain-containing protein | LH20_RS06935 | Not Available | Positive | 1450874 - 1451452 | 21279.2 |
| m13 family metallopeptidase | LH20_RS06940 | Not Available | Positive | 1451549 - 1453612 | 75736.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.