Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. 113P3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
792758 bp
Thymine Count
796672 bp
Guanine Count
1421511 bp
Cytosine Count
1409835 bp
Genome Length
4420776 bp
Protein-coding Genes
4174 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-homoserine-lactone synthase | LH20_RS04900 | Not Available | Positive | 1011225 - 1011830 | 22161.8 |
| phytanoyl-coa dioxygenase family protein | LH20_RS04905 | Not Available | Positive | 1011843 - 1012751 | 32896.5 |
| gntr family transcriptional regulator | LH20_RS04910 | Not Available | Positive | 1012748 - 1013368 | 23133.8 |
| benenodin family lasso peptide | LH20_RS23250 | Not Available | Positive | 1013477 - 1013596 | 4024.57 |
| lasso peptide biosynthesis b2 protein | LH20_RS22770 | Not Available | Positive | 1013653 - 1014303 | 23541.7 |
| asparagine synthase-related protein | LH20_RS04920 | Not Available | Positive | 1014303 - 1015955 | 59130.7 |
| atxe2 family lasso peptide isopeptidase | LH20_RS04925 | Not Available | Negative | 1015898 - 1017856 | 71957.6 |
| tonb-dependent receptor | LH20_RS04930 | Not Available | Negative | 1017874 - 1020780 | 102919.0 |
| atxe2 family lasso peptide isopeptidase | LH20_RS04935 | Not Available | Negative | 1021137 - 1023125 | 72074.9 |
| tonb-dependent receptor | LH20_RS04940 | Not Available | Negative | 1023119 - 1023421 | 10910.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.