Micromonospora rifamycinica

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora rifamycinica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora rifamycinica strain DSM 44983 chromosome I.

Gene Summary

Adenine Count

950843 bp

Thymine Count

942940 bp

Guanine Count

2557916 bp

Cytosine Count

2559570 bp

Genome Length

7011369 bp

Protein-coding Genes

5900 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbohydrate abc transporter permeaseGA0070623_RS24240Not AvailableNegative5746400 - 574744938941.6
abc transporter substrate-binding proteinGA0070623_RS24245Not AvailableNegative5747524 - 574886447929.0
m23 family metallopeptidaseGA0070623_RS24250Not AvailablePositive5749142 - 574991826723.9
tspo/mbr family proteinGA0070623_RS24255Not AvailableNegative5749994 - 575048817937.9
gpgg-motif small membrane proteinGA0070623_RS30460Not AvailableNegative5750662 - 57508055055.72
metallophosphoesteraseGA0070623_RS24260Not AvailableNegative5750848 - 575157024959.8
hypothetical proteinGA0070623_RS24265Not AvailableNegative5751581 - 57518479702.41
nucleotidyltransferaseGA0070623_RS24270Not AvailableNegative5751844 - 575244922663.1
dtmp kinaseGA0070623_RS24275Not AvailablePositive5752605 - 575334826506.6
murr/rpir family transcriptional regulatorGA0070623_RS24280Not AvailablePositive5753497 - 575441132010.2

Displaying genes 4871 – 4880 of 5967 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034715-amino-6-(5-phospho-D-ribosylamino)uracilC9H13N4O9PChemical structure of 5-amino-6-(5-phospho-D-ribosylamino)uracilNot available
Average352.197Da
Monoisotopic352.0431122Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.