Micromonospora rifamycinica

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora rifamycinica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora rifamycinica strain DSM 44983 chromosome I.

Gene Summary

Adenine Count

950843 bp

Thymine Count

942940 bp

Guanine Count

2557916 bp

Cytosine Count

2559570 bp

Genome Length

7011369 bp

Protein-coding Genes

5900 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prephenate dehydrogenaseGA0070623_RS23040Not AvailablePositive5469799 - 547081534768.7
simpl domain-containing proteinGA0070623_RS23045Not AvailablePositive5470863 - 547150123192.4
nucleoside/nucleotide kinase family proteinGA0070623_RS23050Not AvailablePositive5471501 - 547214222874.3
hypothetical proteinGA0070623_RS23055Not AvailableNegative5472125 - 547469591121.0
sugar o-acetyltransferaseGA0070623_RS23060Not AvailableNegative5474789 - 547534619945.8
s8 family serine peptidaseGA0070623_RS23065Not AvailablePositive5475513 - 5478854115902.0
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseGA0070623_RS23070Not AvailableNegative5478974 - 547993033087.7
succinyl-diaminopimelate desuccinylaseGA0070623_RS23075Not AvailablePositive5480003 - 548107638656.7
hypothetical proteinGA0070623_RS30110Not AvailableNegative5481253 - 54814236474.76
condensation domain-containing proteinGA0070623_RS23080Not AvailablePositive5481579 - 548242130306.9

Displaying genes 4631 – 4640 of 5967 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034715-amino-6-(5-phospho-D-ribosylamino)uracilC9H13N4O9PChemical structure of 5-amino-6-(5-phospho-D-ribosylamino)uracilNot available
Average352.197Da
Monoisotopic352.0431122Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.