Micromonospora rifamycinica

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora rifamycinica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora rifamycinica strain DSM 44983 chromosome I.

Gene Summary

Adenine Count

950843 bp

Thymine Count

942940 bp

Guanine Count

2557916 bp

Cytosine Count

2559570 bp

Genome Length

7011369 bp

Protein-coding Genes

5900 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pp2c family protein-serine/threonine phosphataseGA0070623_RS17890Not AvailableNegative4309436 - 431056939225.5
septal ring lytic transglycosylase rlpa family proteinGA0070623_RS17895Not AvailableNegative4310649 - 431129321477.2
phosphoribosyltransferaseGA0070623_RS17900Not AvailablePositive4311513 - 431206419040.9
llm class flavin-dependent oxidoreductaseGA0070623_RS17905Not AvailableNegative4312129 - 431301632655.6
Trna-glyNot AvailableNot AvailablePositive4313138 - 4313211Not Available
zinc metalloproteaseGA0070623_RS17915Not AvailablePositive4313446 - 431448336433.6
pyridoxamine 5'-phosphate oxidase family proteinGA0070623_RS17920Not AvailableNegative4314555 - 431510920066.5
dctp deaminaseGA0070623_RS17925Not AvailablePositive4315290 - 431586821180.3
nlpc/p60 family proteinGA0070623_RS17930Not AvailableNegative4316070 - 431711037442.7
c40 family peptidaseGA0070623_RS17935Not AvailableNegative4317415 - 431842236123.7

Displaying genes 3591 – 3600 of 5967 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034715-amino-6-(5-phospho-D-ribosylamino)uracilC9H13N4O9PChemical structure of 5-amino-6-(5-phospho-D-ribosylamino)uracilNot available
Average352.197Da
Monoisotopic352.0431122Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.