Micromonospora rifamycinica

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora rifamycinica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora rifamycinica strain DSM 44983 chromosome I.

Gene Summary

Adenine Count

950843 bp

Thymine Count

942940 bp

Guanine Count

2557916 bp

Cytosine Count

2559570 bp

Genome Length

7011369 bp

Protein-coding Genes

5900 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
large conductance mechanosensitive channel protein msclGA0070623_RS16885Not AvailablePositive4100785 - 410125516741.6
hypothetical proteinGA0070623_RS16890Not AvailablePositive4101335 - 41015839567.05
hypothetical proteinGA0070623_RS16895Not AvailablePositive4101628 - 410198712423.8
benzoate/h(+) symporter bene family transporterGA0070623_RS16900Not AvailableNegative4102001 - 410323640230.1
helix-turn-helix domain-containing proteinGA0070623_RS16905Not AvailablePositive4103370 - 410393619553.2
helix-turn-helix domain-containing proteinGA0070623_RS16910Not AvailableNegative4103921 - 410495235551.3
pp2c family protein-serine/threonine phosphataseGA0070623_RS16915Not AvailablePositive4105016 - 410573524835.5
enhanced intracellular survival protein eisGA0070623_RS16920Not AvailablePositive4105785 - 410699343984.6
zip family metal transporterGA0070623_RS16925Not AvailablePositive4107154 - 410790325167.9
nad-dependent epimerase/dehydratase family proteinGA0070623_RS16930Not AvailableNegative4108312 - 410939438069.6

Displaying genes 3391 – 3400 of 5967 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034715-amino-6-(5-phospho-D-ribosylamino)uracilC9H13N4O9PChemical structure of 5-amino-6-(5-phospho-D-ribosylamino)uracilNot available
Average352.197Da
Monoisotopic352.0431122Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.