Micromonospora rifamycinica

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora rifamycinica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora rifamycinica strain DSM 44983 chromosome I.

Gene Summary

Adenine Count

950843 bp

Thymine Count

942940 bp

Guanine Count

2557916 bp

Cytosine Count

2559570 bp

Genome Length

7011369 bp

Protein-coding Genes

5900 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
exodeoxyribonuclease vii large subunitGA0070623_RS13945Not AvailablePositive3433797 - 343502344557.5
exodeoxyribonuclease vii small subunitGA0070623_RS13950Not AvailablePositive3435020 - 34352327745.88
alanyl-trna editing proteinGA0070623_RS13955Not AvailableNegative3435279 - 343601626853.2
hypothetical proteinGA0070623_RS13960Not AvailableNegative3436142 - 343698728685.4
duf4245 domain-containing proteinGA0070623_RS13965Not AvailableNegative3437148 - 343778021940.0
class ii fructose-bisphosphataseGA0070623_RS13970Not AvailablePositive3437938 - 343896936142.2
dmt family transporterGA0070623_RS13975Not AvailablePositive3438966 - 343993731329.3
nad(p)/fad-dependent oxidoreductaseGA0070623_RS13980Not AvailableNegative3440040 - 344100833312.9
rhomboid family intramembrane serine proteaseGA0070623_RS13985Not AvailableNegative3441126 - 344177923660.1
transglycosylase slt domain-containing proteinGA0070623_RS13990Not AvailableNegative3441894 - 344258925088.3

Displaying genes 2801 – 2810 of 5967 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034715-amino-6-(5-phospho-D-ribosylamino)uracilC9H13N4O9PChemical structure of 5-amino-6-(5-phospho-D-ribosylamino)uracilNot available
Average352.197Da
Monoisotopic352.0431122Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.