Micromonospora rifamycinica

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora rifamycinica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora rifamycinica strain DSM 44983 chromosome I.

Gene Summary

Adenine Count

950843 bp

Thymine Count

942940 bp

Guanine Count

2557916 bp

Cytosine Count

2559570 bp

Genome Length

7011369 bp

Protein-coding Genes

5900 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix domain-containing proteinGA0070623_RS13560Not AvailablePositive3337343 - 333850340855.7
aipr family proteinGA0070623_RS13565Not AvailablePositive3339074 - 334124280199.8
type i restriction endonuclease subunit rGA0070623_RS13570Not AvailablePositive3341239 - 3344418117154.0
serine/threonine-protein kinaseGA0070623_RS13575Not AvailablePositive3344449 - 334602056671.0
atp-binding proteinGA0070623_RS13580Not AvailablePositive3346127 - 334784261823.9
acyl-coa dehydrogenase family proteinGA0070623_RS13585Not AvailableNegative3347889 - 334905241712.4
udp-glucose dehydrogenase family proteinGA0070623_RS13590Not AvailablePositive3349301 - 335072850640.4
sco7613 c-terminal domain-containing membrane proteinGA0070623_RS13595Not AvailablePositive3350884 - 3355773164502.0
5-(carboxyamino)imidazole ribonucleotide mutaseGA0070623_RS13600Not AvailableNegative3355913 - 335640416708.6
5-(carboxyamino)imidazole ribonucleotide synthaseGA0070623_RS13605Not AvailableNegative3356401 - 335756140866.2

Displaying genes 2721 – 2730 of 5967 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034715-amino-6-(5-phospho-D-ribosylamino)uracilC9H13N4O9PChemical structure of 5-amino-6-(5-phospho-D-ribosylamino)uracilNot available
Average352.197Da
Monoisotopic352.0431122Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.