Micromonospora rifamycinica

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora rifamycinica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora rifamycinica strain DSM 44983 chromosome I.

Gene Summary

Adenine Count

950843 bp

Thymine Count

942940 bp

Guanine Count

2557916 bp

Cytosine Count

2559570 bp

Genome Length

7011369 bp

Protein-coding Genes

5900 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleotide sugar dehydrogenaseGA0070623_RS13120Not AvailableNegative3238310 - 323951243060.2
lmbu family transcriptional regulatorGA0070623_RS13125Not AvailablePositive3240073 - 324082828110.9
Trna-alaNot AvailableNot AvailablePositive3240962 - 3241034Not Available
yqge/algh family proteinGA0070623_RS13135Not AvailableNegative3241143 - 324174221252.5
s-methyl-5'-thioadenosine phosphorylaseGA0070623_RS13140Not AvailablePositive3241884 - 324268728370.8
benzoylformate decarboxylaseGA0070623_RS13145Not AvailablePositive3242854 - 324444956230.3
hypothetical proteinGA0070623_RS31390Not AvailableNegative3244656 - 324570834621.2
Tmrna,resume consensus sequence (at 90): aataagcgccaagcaaaaNot AvailableNot AvailablePositive3246051 - 3246426Not Available
ssra-binding protein smpbGA0070623_RS13160Not AvailableNegative3246531 - 324701018041.7
permease-like cell division protein ftsxGA0070623_RS13165Not AvailableNegative3247146 - 324802132228.1

Displaying genes 2631 – 2640 of 5967 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034715-amino-6-(5-phospho-D-ribosylamino)uracilC9H13N4O9PChemical structure of 5-amino-6-(5-phospho-D-ribosylamino)uracilNot available
Average352.197Da
Monoisotopic352.0431122Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.