Micromonospora rifamycinica

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora rifamycinica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora rifamycinica strain DSM 44983 chromosome I.

Gene Summary

Adenine Count

950843 bp

Thymine Count

942940 bp

Guanine Count

2557916 bp

Cytosine Count

2559570 bp

Genome Length

7011369 bp

Protein-coding Genes

5900 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataGA0070623_RS11865Not AvailableNegative2932909 - 293438451219.0
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcGA0070623_RS11870Not AvailableNegative2934461 - 293476610796.8
putative bifunctional diguanylate cyclase/phosphodiesteraseGA0070623_RS11875Not AvailableNegative2934985 - 293749288427.5
nad-dependent dna ligase ligaGA0070623_RS11880Not AvailableNegative2937801 - 293995777307.2
type ii toxin-antitoxin system pemk/mazf family toxinGA0070623_RS11885Not AvailablePositive2940121 - 294063319305.8
adp-ribosylglycohydrolase family proteinGA0070623_RS11890Not AvailableNegative2940649 - 294165035283.7
voc family proteinGA0070623_RS11895Not AvailableNegative2941778 - 294214613216.7
methionine synthaseGA0070623_RS11900Not AvailableNegative2942184 - 294319134987.4
trna 2-thiouridine(34) synthase mnmaGA0070623_RS11905Not AvailableNegative2943221 - 294429437605.7
cysteine desulfurase family proteinGA0070623_RS11910Not AvailableNegative2944909 - 294608440768.2

Displaying genes 2371 – 2380 of 5967 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034715-amino-6-(5-phospho-D-ribosylamino)uracilC9H13N4O9PChemical structure of 5-amino-6-(5-phospho-D-ribosylamino)uracilNot available
Average352.197Da
Monoisotopic352.0431122Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.