Micromonospora rifamycinica

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora rifamycinica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora rifamycinica strain DSM 44983 chromosome I.

Gene Summary

Adenine Count

950843 bp

Thymine Count

942940 bp

Guanine Count

2557916 bp

Cytosine Count

2559570 bp

Genome Length

7011369 bp

Protein-coding Genes

5900 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
signal peptidase iGA0070623_RS11220Not AvailableNegative2784642 - 278527723616.9
condensation domain-containing proteinGA0070623_RS11225Not AvailableNegative2785397 - 278626031523.4
50s ribosomal protein l19GA0070623_RS11230Not AvailableNegative2786453 - 278680913465.3
trna (guanosine(37)-n1)-methyltransferase trmdGA0070623_RS11235Not AvailableNegative2786954 - 278774228499.2
ribosome maturation factor rimmGA0070623_RS11240Not AvailableNegative2787759 - 278834020048.0
rna-binding proteinGA0070623_RS11245Not AvailableNegative2788343 - 27886039516.67
30s ribosomal protein s16GA0070623_RS11250Not AvailableNegative2788578 - 278904816782.1
duf402 domain-containing proteinGA0070623_RS11255Not AvailableNegative2789290 - 278993724585.8
proline--trna ligaseGA0070623_RS11260Not AvailableNegative2790243 - 279164950870.6
amidohydrolase family proteinGA0070623_RS11265Not AvailableNegative2791906 - 279298537906.3

Displaying genes 2241 – 2250 of 5967 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034715-amino-6-(5-phospho-D-ribosylamino)uracilC9H13N4O9PChemical structure of 5-amino-6-(5-phospho-D-ribosylamino)uracilNot available
Average352.197Da
Monoisotopic352.0431122Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.