Micromonospora rifamycinica

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora rifamycinica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora rifamycinica strain DSM 44983 chromosome I.

Gene Summary

Adenine Count

950843 bp

Thymine Count

942940 bp

Guanine Count

2557916 bp

Cytosine Count

2559570 bp

Genome Length

7011369 bp

Protein-coding Genes

5900 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yifb family mg chelatase-like aaa atpaseGA0070623_RS11170Not AvailablePositive2774026 - 277554652936.3
dna-processing protein dpraGA0070623_RS11175Not AvailablePositive2775543 - 277672741362.8
serine hydrolase domain-containing proteinGA0070623_RS11180Not AvailablePositive2776781 - 277811245956.3
tyrosine recombinase xercGA0070623_RS11185Not AvailablePositive2778315 - 277931635510.6
aminotransferase class v-fold plp-dependent enzymeGA0070623_RS11190Not AvailablePositive2779546 - 278072741843.5
condensation domain-containing proteinGA0070623_RS11195Not AvailableNegative2780842 - 278143820302.0
sulfite oxidaseGA0070623_RS11200Not AvailablePositive2781814 - 278292040358.9
duf2469 domain-containing proteinGA0070623_RS11205Not AvailableNegative2782975 - 278329812900.1
ribonuclease hiiGA0070623_RS11210Not AvailableNegative2783295 - 278410728374.1
nudix hydrolaseGA0070623_RS11215Not AvailableNegative2784101 - 278458317538.5

Displaying genes 2231 – 2240 of 5967 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034715-amino-6-(5-phospho-D-ribosylamino)uracilC9H13N4O9PChemical structure of 5-amino-6-(5-phospho-D-ribosylamino)uracilNot available
Average352.197Da
Monoisotopic352.0431122Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.