Micromonospora rifamycinica

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora rifamycinica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora rifamycinica strain DSM 44983 chromosome I.

Gene Summary

Adenine Count

950843 bp

Thymine Count

942940 bp

Guanine Count

2557916 bp

Cytosine Count

2559570 bp

Genome Length

7011369 bp

Protein-coding Genes

5900 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cellulase family glycosylhydrolaseGA0070623_RS09725Not AvailableNegative2433062 - 243445048609.6
tigr03557 family f420-dependent llm class oxidoreductaseGA0070623_RS09730Not AvailablePositive2434877 - 243583934945.0
endonuclease/exonuclease/phosphatase family proteinGA0070623_RS09735Not AvailableNegative2436318 - 243723832391.6
phosphatase pap2 family proteinGA0070623_RS09740Not AvailableNegative2437249 - 243874254687.4
yihy/virulence factor brkb family proteinGA0070623_RS09745Not AvailableNegative2438825 - 243982635909.7
diacylglycerol/lipid kinase family proteinGA0070623_RS09750Not AvailableNegative2439819 - 244082636222.3
clp protease n-terminal domain-containing proteinGA0070623_RS09755Not AvailableNegative2440930 - 244151421032.1
hth domain-containing proteinGA0070623_RS09760Not AvailableNegative2441511 - 24417478671.31
pp2c family protein-serine/threonine phosphataseGA0070623_RS09765Not AvailablePositive2441863 - 244266629052.6
universal stress proteinGA0070623_RS09770Not AvailablePositive2442763 - 244359327667.2

Displaying genes 1941 – 1950 of 5967 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034715-amino-6-(5-phospho-D-ribosylamino)uracilC9H13N4O9PChemical structure of 5-amino-6-(5-phospho-D-ribosylamino)uracilNot available
Average352.197Da
Monoisotopic352.0431122Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.