Micromonospora rifamycinica

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora rifamycinica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora rifamycinica strain DSM 44983 chromosome I.

Gene Summary

Adenine Count

950843 bp

Thymine Count

942940 bp

Guanine Count

2557916 bp

Cytosine Count

2559570 bp

Genome Length

7011369 bp

Protein-coding Genes

5900 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytidine deaminase family proteinGA0070623_RS08585Not AvailableNegative2119035 - 211951716852.4
atp-dependent rna helicase hrpaGA0070623_RS08590Not AvailablePositive2119811 - 2123863150299.0
lysr family transcriptional regulatorGA0070623_RS08595Not AvailableNegative2123864 - 212480233746.2
succinate dehydrogenase cytochrome b subunitGA0070623_RS08600Not AvailablePositive2124931 - 212556323151.8
fumarate reductase/succinate dehydrogenase flavoprotein subunitGA0070623_RS08605Not AvailablePositive2125565 - 212750271781.5
succinate dehydrogenase/fumarate reductase iron-sulfur subunitGA0070623_RS08610Not AvailablePositive2127499 - 212826026732.9
zinc-dependent alcohol dehydrogenaseGA0070623_RS08615Not AvailablePositive2128752 - 212993642438.4
sdr family nad(p)-dependent oxidoreductaseGA0070623_RS08620Not AvailablePositive2129933 - 213091634226.6
mbl fold metallo-hydrolaseGA0070623_RS08625Not AvailablePositive2131052 - 213219742162.2
deoxyguanosinetriphosphate triphosphohydrolase family proteinGA0070623_RS08630Not AvailableNegative2132235 - 213374654857.2

Displaying genes 1711 – 1720 of 5967 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034715-amino-6-(5-phospho-D-ribosylamino)uracilC9H13N4O9PChemical structure of 5-amino-6-(5-phospho-D-ribosylamino)uracilNot available
Average352.197Da
Monoisotopic352.0431122Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.