Micromonospora rifamycinica

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora rifamycinica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora rifamycinica strain DSM 44983 chromosome I.

Gene Summary

Adenine Count

950843 bp

Thymine Count

942940 bp

Guanine Count

2557916 bp

Cytosine Count

2559570 bp

Genome Length

7011369 bp

Protein-coding Genes

5900 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
na+/h+ antiporterGA0070623_RS08485Not AvailableNegative2098895 - 210047256098.6
tigr03885 family fmn-dependent llm class oxidoreductaseGA0070623_RS08490Not AvailableNegative2100507 - 210147235069.4
nadp-dependent succinic semialdehyde dehydrogenaseGA0070623_RS08495Not AvailableNegative2101557 - 210296950258.4
duf6343 family proteinGA0070623_RS08500Not AvailableNegative2102982 - 21032459617.09
gdsl-type esterase/lipase family proteinGA0070623_RS08505Not AvailablePositive2103445 - 210429930793.3
ecsc family proteinGA0070623_RS08510Not AvailableNegative2104330 - 210507025923.2
hypothetical proteinGA0070623_RS30340Not AvailableNegative2105285 - 21054345592.9
peptidase m23GA0070623_RS08520Not AvailableNegative2105616 - 210652131792.9
proteasome assembly chaperone family proteinGA0070623_RS08525Not AvailablePositive2106939 - 210785933709.8
exodeoxyribonuclease iiiGA0070623_RS08530Not AvailablePositive2108004 - 210879828198.4

Displaying genes 1691 – 1700 of 5967 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034715-amino-6-(5-phospho-D-ribosylamino)uracilC9H13N4O9PChemical structure of 5-amino-6-(5-phospho-D-ribosylamino)uracilNot available
Average352.197Da
Monoisotopic352.0431122Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.