Micromonospora rifamycinica

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora rifamycinica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora rifamycinica strain DSM 44983 chromosome I.

Gene Summary

Adenine Count

950843 bp

Thymine Count

942940 bp

Guanine Count

2557916 bp

Cytosine Count

2559570 bp

Genome Length

7011369 bp

Protein-coding Genes

5900 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf624 domain-containing proteinGA0070623_RS05870Not AvailableNegative1370116 - 137079924107.4
gh39 family glycosyl hydrolaseGA0070623_RS05875Not AvailableNegative1370796 - 137236757754.0
extracellular solute-binding proteinGA0070623_RS05880Not AvailableNegative1372443 - 137405660091.5
carbohydrate abc transporter permeaseGA0070623_RS05885Not AvailableNegative1374129 - 137507033952.1
abc transporter permeaseGA0070623_RS05890Not AvailableNegative1375067 - 137603236314.9
glycoside hydrolase family 3 n-terminal domain-containing proteinGA0070623_RS05895Not AvailableNegative1376043 - 137842783521.7
laci family dna-binding transcriptional regulatorGA0070623_RS05900Not AvailablePositive1378710 - 137975036999.4
acetylxylan esteraseGA0070623_RS05905Not AvailablePositive1379766 - 138076135624.9
cellulose binding domain-containing proteinGA0070623_RS05910Not AvailablePositive1381302 - 138242938617.3
family 43 glycosylhydrolaseGA0070623_RS05915Not AvailablePositive1382513 - 138457674182.7

Displaying genes 1181 – 1190 of 5967 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034715-amino-6-(5-phospho-D-ribosylamino)uracilC9H13N4O9PChemical structure of 5-amino-6-(5-phospho-D-ribosylamino)uracilNot available
Average352.197Da
Monoisotopic352.0431122Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.