Micromonospora rifamycinica

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Micromonospora

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora rifamycinica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Micromonospora rifamycinica strain DSM 44983 chromosome I.

Gene Summary

Adenine Count

950843 bp

Thymine Count

942940 bp

Guanine Count

2557916 bp

Cytosine Count

2559570 bp

Genome Length

7011369 bp

Protein-coding Genes

5900 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
galactofuranose abc transporter, permease protein yjffGA0070623_RS05820Not AvailableNegative1358032 - 135902434579.5
abc transporter permeaseGA0070623_RS05825Not AvailableNegative1359021 - 136009136762.2
sugar abc transporter atp-binding proteinGA0070623_RS05830Not AvailableNegative1360088 - 136163556015.8
abc transporter substrate-binding proteinGA0070623_RS05835Not AvailableNegative1361699 - 136271835514.2
l-ribulose-5-phosphate 4-epimeraseGA0070623_RS05840Not AvailableNegative1362884 - 136356123841.4
ribulokinaseGA0070623_RS05845Not AvailableNegative1363558 - 136525559454.2
d-mannonate dehydratase mandGA0070623_RS05850Not AvailablePositive1365642 - 136685044392.9
voc family proteinGA0070623_RS05855Not AvailableNegative1366914 - 136732414872.7
helix-turn-helix transcriptional regulatorGA0070623_RS05860Not AvailableNegative1367334 - 136777716496.0
alpha-glucuronidaseGA0070623_RS05865Not AvailableNegative1367915 - 137011979973.8

Displaying genes 1171 – 1180 of 5967 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034715-amino-6-(5-phospho-D-ribosylamino)uracilC9H13N4O9PChemical structure of 5-amino-6-(5-phospho-D-ribosylamino)uracilNot available
Average352.197Da
Monoisotopic352.0431122Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.