Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus yeomjeoni |
| Strain | DSM 23446 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478414 bp
Thymine Count
1490615 bp
Guanine Count
996609 bp
Cytosine Count
1005554 bp
Genome Length
4976181 bp
Protein-coding Genes
4232 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-carotene 3-hydroxylase | LV83_00433 | Not Available | Positive | 508207 - 508644 | 16785.8 |
| dna-binding transcriptional merr regulator | LV83_00434 | Not Available | Positive | 508650 - 509540 | 33586.8 |
| rna polymerase sigma-70 factor (ecf subfamily) | LV83_00435 | Not Available | Positive | 509751 - 510263 | 19748.6 |
| phytoene desaturase | LV83_00436 | Not Available | Positive | 510268 - 511746 | 55757.6 |
| phytoene/squalene synthetase | LV83_00437 | Not Available | Positive | 511768 - 512610 | 32209.7 |
| lycopene cyclase domain-containing protein | LV83_00438 | Not Available | Positive | 512613 - 513308 | 27482.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | LV83_00439 | Not Available | Positive | 513327 - 514172 | 31792.6 |
| beta-carotene ketolase (crtw type) | LV83_00440 | Not Available | Positive | 514196 - 514909 | 28099.7 |
| outer membrane receptor protein involved in fe transport | LV83_00441 | Not Available | Positive | 514937 - 517339 | 90579.8 |
| bacteriocin resistance ydei/ompd-like protein | LV83_00442 | Not Available | Negative | 517342 - 517794 | 17306.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
