Algoriphagus yeomjeoni str. DSM 23446

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus yeomjeoni strain DSM 23446 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This microbe thrives optimally at a temperature of 29.0°C, suggesting a potential preference for moderate environmental conditions. Its Gram-negative classification indicates the presence of an outer membrane, which may contribute to its adaptability in various aquatic environments. As an aerobic organism, A. yeomjeoni relies on oxygen for its metabolic processes, which could influence its distribution in oxygen-rich niches, such as coastal waters or sediment layers. The specific environmental conditions under which this bacterium flourishes could provide insights into its ecological role, particularly in biogeochemical cycles involving nitrogen or carbon, given the importance of aerobic respiration in these processes. The isolation of A. yeomjeoni from its native milieu may reflect its adaptation to specific ecological settings, potentially linking it to organic matter degradation or nutrient cycling in marine environments. Further research into its metabolic capabilities and interactions with other microorganisms could elucidate its function within microbial communities and its contribution to ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus yeomjeoni
StrainDSM 23446

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus yeomjeoni strain DSM 23446

Gene Summary

Adenine Count

1478414 bp

Thymine Count

1490615 bp

Guanine Count

996609 bp

Cytosine Count

1005554 bp

Genome Length

4976181 bp

Protein-coding Genes

4232 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-b regulation protein rsbu (phosphoserine phosphatase)LV83_02140Not AvailablePositive2432576 - 243378746013.5
peptidoglycan/xylan/chitin deacetylase (pgda/cda1 family)LV83_02141Not AvailablePositive2433788 - 243441424095.2
cellulose synthase/poly-beta-1,6-n-acetylglucosamine synthase-like glycosyltransferaseLV83_02142Not AvailablePositive2434411 - 243552042006.6
tatd dnase family proteinLV83_02143Not AvailablePositive2435650 - 243642629337.3
l-asparaginaseLV83_02144Not AvailablePositive2436423 - 243749039178.6
hypothetical proteinLV83_02145Not AvailablePositive2437658 - 243832925515.1
Trna-serNot AvailableNot AvailablePositive2438484 - 2438573Not Available
biopolymer transport protein exbbLV83_02147Not AvailablePositive2439642 - 244044828615.4
hypothetical proteinLV83_02148Not AvailablePositive2440505 - 244083411564.6
biopolymer transport protein exbdLV83_02149Not AvailablePositive2440836 - 244147123101.3

Displaying genes 2141 – 2150 of 4280 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.