Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis rifamycinica |
| Strain | DSM 46095 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1295651 bp
Thymine Count
1294980 bp
Guanine Count
3308542 bp
Cytosine Count
3303241 bp
Genome Length
9202418 bp
Protein-coding Genes
8307 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphokinase | DV20_00060 | Not Available | Positive | 11062 - 12246 | 41597.4 |
| hypothetical protein | DV20_00065 | Not Available | Positive | 12243 - 13193 | 31107.9 |
| asp/glu/hydantoin racemase | DV20_00070 | Not Available | Negative | 13199 - 13906 | 24650.7 |
| nitrate reductase | DV20_00075 | Not Available | Negative | 13903 - 15324 | 51561.4 |
| gntr family transcriptional regulator | DV20_00080 | Not Available | Positive | 15475 - 16143 | 24718.5 |
| peptidase s8 | DV20_00085 | Not Available | Positive | 16306 - 17496 | 39256.3 |
| acyltransferase | DV20_00090 | Not Available | Positive | 17733 - 18893 | 43036.1 |
| ctp synthetase | DV20_00095 | Not Available | Positive | 19109 - 20683 | 57243.1 |
| adp-ribose pyrophosphatase | DV20_00100 | Not Available | Positive | 20680 - 21309 | 22355.7 |
| hypothetical protein | DV20_00105 | Not Available | Negative | 21331 - 21852 | 18615.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.